Precursor miRBase

cfa-mir-200c (MI0008070)

Accession MI0008070
Name cfa-mir-200c
similar to following miRCarta precursors cfa-54.1
Organism Canis familiaris
Genome CanFam3.1
Location chr27:38,082,097-38,082,159 (-)
miRNA cfa-miR-200c
Sequence (5' -> 3')
(63 nts)
CGUCUUACCCAGCAGUGUUUGGGUGCUGGUUGGGAGUCUCUAAUACUGCCGGGUAAUGAUGGA
MFE -28.60 kcal/mol
first miRBase version 11.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
cfa-mir-141
cfa-mir-200c
Family mir-8 (MIPF0000019)
Experiments
experiment Pubmed link
Illumina 18392026
External DBs
Gene symbol MIR200C
NCBI Gene 100885912

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Friedländer et al. Nat. Biotechnol. 2008 18392026 Discovering microRNAs from deep sequencing data using miRDeep.