Precursor miRBase

hsa-mir-1180 (MI0006273)

Accession MI0006273
Name hsa-mir-1180
similar to following miRCarta precursors hsa-1549-214.1
Organism Homo sapiens
Genome GRCh38.p10
Location chr17:19,344,506-19,344,574 (-)
miRNA hsa-miR-1180-5p
miRNA hsa-miR-1180-3p
Sequence (5' -> 3')
(69 nts)
GCUGCUGGACCCACCCGGCCGGGAAUAGUGCUCCUGGUUGUUUCCGGCUCGCGUGGGUGUGUCGGCGGC
MFE -39.00 kcal/mol
first miRBase version 11.0
last miRBase version 21.0
Clusters (10 kb)
(1 precursors)
hsa-mir-1180
Family mir-1180 (MIPF0000789)
Experiments
experiment Pubmed link
Illumina 23034410
External DBs
Gene symbol MIR1180
NCBI Gene 100302256

External tools

Links
HMDD

Predicted Structure

5f16af22-5448-42a4-8f64-8d0cddb4e499bb9cd47b-8d8e-4c05-b0ee-e74b96ddbaf3d1f98783-163c-4543-a130-c9473d3511d8e7c07511-ff45-4dc6-935f-42c7192ffd675f16af22-5448-42a4-8f64-8d0cddb4e499d1f98783-163c-4543-a130-c9473d3511d88e7087ef-3c15-4f85-a977-c446269eb0d80b972c55-e8c5-40e7-89a9-955728cb5d85d1f98783-163c-4543-a130-c9473d3511d88e7087ef-3c15-4f85-a977-c446269eb0d802169873-7224-442e-bfd5-6bc01d12d3429cbe9ec3-c99c-49f3-92cf-b0286de2e9d48e7087ef-3c15-4f85-a977-c446269eb0d802169873-7224-442e-bfd5-6bc01d12d34221edb286-e0d0-44d5-bc5c-1031a2a19e69f95016d9-38e1-41b9-9955-6fd5476b81f002169873-7224-442e-bfd5-6bc01d12d34221edb286-e0d0-44d5-bc5c-1031a2a19e6919cbfecb-5f6f-4217-a32c-2ac4f49dce4ca5165ddf-6513-4a3e-a23a-e9c6aaec42f521edb286-e0d0-44d5-bc5c-1031a2a19e6919cbfecb-5f6f-4217-a32c-2ac4f49dce4cb81e038d-9b44-4425-9260-2bc811b6931c2709d2d8-d4f7-43d7-a4d7-1531c3475d1319cbfecb-5f6f-4217-a32c-2ac4f49dce4cb81e038d-9b44-4425-9260-2bc811b6931cf520a7d7-e312-4cf0-828b-2422b5602d57e8265b8e-fe22-40e2-8454-b6a8dbc3be69b81e038d-9b44-4425-9260-2bc811b6931cf520a7d7-e312-4cf0-828b-2422b5602d57cec5c56c-7a95-4166-8eba-d24af03fc3b1864040ce-b7f4-478d-9fa9-587c3e20cd60f520a7d7-e312-4cf0-828b-2422b5602d57cec5c56c-7a95-4166-8eba-d24af03fc3b15ece6351-8c3b-4115-92ef-141a8f3268de2f45b7a9-e1d9-4a80-b83c-b6539ddef129cec5c56c-7a95-4166-8eba-d24af03fc3b15ece6351-8c3b-4115-92ef-141a8f3268deb1f1c15f-1333-4813-ae89-e8cbe773986c581a68cb-705f-4566-8285-3321794516875ece6351-8c3b-4115-92ef-141a8f3268deb1f1c15f-1333-4813-ae89-e8cbe773986c8d2a9b18-f2aa-478f-b055-1f32a9107017c6ff5982-6b48-43b4-911f-099ac022e5fdb1f1c15f-1333-4813-ae89-e8cbe773986c8d2a9b18-f2aa-478f-b055-1f32a9107017d1b72cb8-0fff-4eed-8468-388caaa01674ac4f65fc-db11-4a53-bb11-579f5fce4f238d2a9b18-f2aa-478f-b055-1f32a9107017d1b72cb8-0fff-4eed-8468-388caaa01674eb373908-bc7f-4da0-a42d-ca2cd3aefadcab4b8b8b-0747-47a6-a8b4-9eed1e84ebccd1b72cb8-0fff-4eed-8468-388caaa01674eb373908-bc7f-4da0-a42d-ca2cd3aefadceb373908-bc7f-4da0-a42d-ca2cd3aefadcaf401ed2-ff09-4212-93fb-f48503ccf84d07d7b63f-ef8f-43ef-aa0a-44f450f5e0e628c153dd-3758-46ae-ae5f-086095305109af401ed2-ff09-4212-93fb-f48503ccf84d07d7b63f-ef8f-43ef-aa0a-44f450f5e0e64f6af7d8-8bf0-4943-a5cd-b774f7fb3a96699fea94-2b7f-43ac-898e-62229d69beaf07d7b63f-ef8f-43ef-aa0a-44f450f5e0e64f6af7d8-8bf0-4943-a5cd-b774f7fb3a968c900a18-fb6b-4714-a5ad-de5718034f9939025d2d-5afe-4bf4-924f-63b241fb64394f6af7d8-8bf0-4943-a5cd-b774f7fb3a968c900a18-fb6b-4714-a5ad-de5718034f99e7b36d35-c69a-4eff-bc91-d3b9f1095c19b6a9a7c0-5cfa-4796-8c40-3ee786d3d8258c900a18-fb6b-4714-a5ad-de5718034f99e7b36d35-c69a-4eff-bc91-d3b9f1095c19b9101ad8-6b5d-4d8b-8c45-c3817387d72558e7128d-c7c7-4a85-8c5b-3d7d34d27f0de7b36d35-c69a-4eff-bc91-d3b9f1095c19b9101ad8-6b5d-4d8b-8c45-c3817387d7258c7029bd-296f-422d-8aa7-027bd78c76f1482e2ecc-862d-4e23-b468-ddaaba6741b0b9101ad8-6b5d-4d8b-8c45-c3817387d7258c7029bd-296f-422d-8aa7-027bd78c76f103ed0024-3afb-4169-966b-7e279bb6a609074a82f0-68b5-4d29-b297-9ce5682804e88c7029bd-296f-422d-8aa7-027bd78c76f103ed0024-3afb-4169-966b-7e279bb6a609d9f5aaaf-6ba0-41c6-8bf0-3684a288f4d8a82dbe5f-e27b-4ae2-9bb9-70641ae2ddb303ed0024-3afb-4169-966b-7e279bb6a609d9f5aaaf-6ba0-41c6-8bf0-3684a288f4d80904d857-3937-4bcc-81d0-2bf43e8e551a7ee4c8ba-52d2-4dff-bd74-649c34fcfd9dd9f5aaaf-6ba0-41c6-8bf0-3684a288f4d80904d857-3937-4bcc-81d0-2bf43e8e551a8f86547c-b3d1-4f93-919a-1cfd75dd707a5ace7482-8cfd-46ab-93e0-8d2ca5e1f8760904d857-3937-4bcc-81d0-2bf43e8e551a8f86547c-b3d1-4f93-919a-1cfd75dd707a8258573a-d412-4fbd-8f7f-efee1e9929da32f22335-e397-4df2-8edc-2355f690f9808f86547c-b3d1-4f93-919a-1cfd75dd707a8258573a-d412-4fbd-8f7f-efee1e9929da233bf898-28f4-4b46-9d6e-cb9f0974b6240cd0211f-f9fe-4be1-ad1b-446ede38955a8258573a-d412-4fbd-8f7f-efee1e9929da233bf898-28f4-4b46-9d6e-cb9f0974b624233bf898-28f4-4b46-9d6e-cb9f0974b624e83d7c82-c61c-46d3-98d3-873bd0cc2553e83d7c82-c61c-46d3-98d3-873bd0cc2553987794f5-3cda-4d2b-a60e-f7ee989ad9a8a2be704e-9f93-411a-af3b-4b37937b4465569c731f-ef60-4146-9c60-0164a841c6bf987794f5-3cda-4d2b-a60e-f7ee989ad9a8a2be704e-9f93-411a-af3b-4b37937b4465d19e1a10-5610-4320-8b53-1ae146c9bcf29ede5095-1051-4f97-8230-2b538175514ca2be704e-9f93-411a-af3b-4b37937b4465d19e1a10-5610-4320-8b53-1ae146c9bcf2e98439df-7d6d-41a7-b692-cf7b78262d75cfdc75f1-b145-4467-bc62-150ad158af98d19e1a10-5610-4320-8b53-1ae146c9bcf2e98439df-7d6d-41a7-b692-cf7b78262d75e98439df-7d6d-41a7-b692-cf7b78262d75951f59db-b65b-4d47-a096-de637be75dce951f59db-b65b-4d47-a096-de637be75dce6c587155-7361-42ed-97f0-9165326f152a6c587155-7361-42ed-97f0-9165326f152af7ca1298-bece-4b78-807d-bad1e53dfdb3cfdc75f1-b145-4467-bc62-150ad158af98e98439df-7d6d-41a7-b692-cf7b78262d75f7ca1298-bece-4b78-807d-bad1e53dfdb3cfdc75f1-b145-4467-bc62-150ad158af989ede5095-1051-4f97-8230-2b538175514cd19e1a10-5610-4320-8b53-1ae146c9bcf2cfdc75f1-b145-4467-bc62-150ad158af989ede5095-1051-4f97-8230-2b538175514c569c731f-ef60-4146-9c60-0164a841c6bfa2be704e-9f93-411a-af3b-4b37937b44659ede5095-1051-4f97-8230-2b538175514c569c731f-ef60-4146-9c60-0164a841c6bf0cd0211f-f9fe-4be1-ad1b-446ede38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mpty:16Chsa-miR-1180-5phsa-miR-1180-5pempty:17Ghsa-miR-1180-5phsa-miR-1180-5pempty:18Ghsa-miR-1180-5phsa-miR-1180-5pempty:19Chsa-miR-1180-5phsa-miR-1180-5pempty:20Chsa-miR-1180-5phsa-miR-1180-5pempty:21Ghsa-miR-1180-5phsa-miR-1180-5pempty:22Ghsa-miR-1180-5phsa-miR-1180-5pempty:23Ghsa-miR-1180-5phsa-miR-1180-5pempty:24Ahsa-miR-1180-5phsa-miR-1180-5pempty:25Ahsa-miR-1180-5phsa-miR-1180-5pempty:26Uhsa-miR-1180-5phsa-miR-1180-5pempty:27Ahsa-miR-1180-5pempty:28empty:28Gempty:28empty:29empty:29Uempty:29empty:30empty:30Gempty:30empty:31empty:31Cempty:31empty:32empty:32Uempty:32empty:33empty:33Cempty:33empty:34empty:34Cempty:34empty:35empty:35Uempty:35empty:36empty:36Gempty:36empty:37empty:37Gempty:37empty:38empty:38Uempty:38empty:39empty:39Uempty:39empty:40empty:40Gempty:40hsa-miR-1180-3pempty:41Uhsa-miR-1180-3phsa-miR-1180-3pempty:42Uhsa-miR-1180-3phsa-miR-1180-3pempty:43Uhsa-miR-1180-3phsa-miR-1180-3pempty:44Chsa-miR-1180-3phsa-miR-1180-3pempty:45Chsa-miR-1180-3phsa-miR-1180-3pempty:46Ghsa-miR-1180-3phsa-miR-1180-3pempty:47Ghsa-miR-1180-3phsa-miR-1180-3pempty:48Chsa-miR-1180-3phsa-miR-1180-3pempty:49Uhsa-miR-1180-3phsa-miR-1180-3pempty:50Chsa-miR-1180-3phsa-miR-1180-3pempty:51Ghsa-miR-1180-3phsa-miR-1180-3pempty:52Chsa-miR-1180-3phsa-miR-1180-3pempty:53Ghsa-miR-1180-3phsa-miR-1180-3pempty:54Uhsa-miR-1180-3phsa-miR-1180-3pempty:55Ghsa-miR-1180-3phsa-miR-1180-3pempty:56Ghsa-miR-1180-3phsa-miR-1180-3pempty:57Ghsa-miR-1180-3phsa-miR-1180-3pempty:58Uhsa-miR-1180-3phsa-miR-1180-3pempty:59Ghsa-miR-1180-3phsa-miR-1180-3pempty:60Uhsa-miR-1180-3phsa-miR-1180-3pempty:61Ghsa-miR-1180-3phsa-miR-1180-3pempty:62Uhsa-miR-1180-3pempty:63empty:63Cempty:63empty:64empty:64Gempty:64empty:65empty:65Gempty:65empty:66empty:66Cempty:66empty:67empty:67Gempty:67empty:68empty:68Gempty:68empty:69empty:69Cempty:69102030405060
GCUGCUGGACCCACCCGGCCGGGAAUAGUGCUCCUGGUUGUUUCCGGCUCGCGUGGGUGUGUCGGCGGC00.5M1M
RPMMone mismatchno mismatch
GCUGCUGGACCCACCCGGCCGGGAAUAGUGCUCCUGGUUGUUUCCGGCUCGCGUGGGUGUGUCGGCGGC02M4M6M
number of readsone mismatchno mismatch

References

Authors Journal Year Pubmed link Title
1 Subramanian et al. Oncogene 2008 17922033 MicroRNA expression signature of human sarcomas.
2 Nygaard et al. BMC Med Genomics 2009 19508715 Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing.
3 Meunier et al. Genome Res. 2013 23034410 Birth and expression evolution of mammalian microRNA genes.
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