Precursor miRBase

rno-mir-380 (MI0006141)

Accession MI0006141
Name rno-mir-380
similar to following miRCarta precursors rno-762-25217.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,022,661-143,022,737 (+)
miRNA rno-miR-380-5p
miRNA rno-miR-380-3p
Sequence (5' -> 3')
(77 nts)
ACCUGAAAAGAUGGUUGACCAUAGAACAUGCGCUACUUCUGUGUCGUAUGUAGUAUGGUCCACAUCUUCUCAUUAUC
MFE -31.30 kcal/mol
first miRBase version 10.0
last miRBase version 21.0
Clusters (10 kb)
(16 precursors)
rno-mir-379
rno-mir-411
rno-mir-299b
rno-mir-299a
rno-mir-3579
rno-mir-380
rno-mir-323
rno-mir-758
rno-mir-329
rno-mir-494
rno-mir-679
rno-mir-1193
rno-mir-666
rno-mir-543
rno-mir-495
rno-mir-667
Family mir-379 (MIPF0000126)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir380
NCBI Gene 100314173

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.