Precursor miRBase

rno-mir-188 (MI0006134)

Accession MI0006134
Name rno-mir-188
similar to following miRCarta precursors rno-29680-545.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chrX:16,895,394-16,895,473 (+)
miRNA rno-miR-188-5p
miRNA rno-miR-188-3p
Sequence (5' -> 3')
(80 nts)
CCCUCUCUCACAUCCCUUGCAUGGUGGAGGGCGAGCUCUCUGAAAACUCCUCCCACAUGCAGGGUUUGCAGGAUGGUGAG
MFE -28.70 kcal/mol
first miRBase version 10.0
last miRBase version 21.0
Clusters (10 kb)
(5 precursors)
rno-mir-532
rno-mir-188
rno-mir-362
rno-mir-3560
rno-mir-501
Family mir-188 (MIPF0000113)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir188
NCBI Gene 100314102

Predicted Structure

82d7ee65-b3c5-493c-bd26-2c6acac7437dc99fb13f-6f88-468a-9132-805862371d01c99fb13f-6f88-468a-9132-805862371d01d54bf117-a8a8-4f9e-951b-e63570a0160ed54bf117-a8a8-4f9e-951b-e63570a0160e42db41df-1ade-467c-9e12-08fedd60e55b42db41df-1ade-467c-9e12-08fedd60e55b0a1070e7-2df7-4305-a1df-325a094dcb9b0a1070e7-2df7-4305-a1df-325a094dcb9b8cf63654-f11b-4f30-a124-b64e9c28ce7814068a13-f30c-4cbe-a92e-e63aca6ee439757216fa-0f8d-46c2-95e0-51c8abb6ec7e8cf63654-f11b-4f30-a124-b64e9c28ce7814068a13-f30c-4cbe-a92e-e63aca6ee4396582bf36-6b4f-4138-85c1-914ac790e46f299902a7-31ec-4f5e-a17a-67a338e5143414068a13-f30c-4cbe-a92e-e63aca6ee4396582bf36-6b4f-4138-85c1-914ac790e46f326c4dac-d8aa-4cac-ac5c-9e0f7d2442f0cdd1c0f6-4bed-42d9-8c29-fdc06adfa5bd6582bf36-6b4f-4138-85c1-914ac790e46f326c4dac-d8aa-4cac-ac5c-9e0f7d2442f0f972a207-9c83-4d5b-8167-f36817532a6ba37794ae-8bc7-4d44-9480-9a128ced23a2326c4dac-d8aa-4cac-ac5c-9e0f7d2442f0f972a207-9c83-4d5b-8167-f36817532a6be613e100-1f86-46f3-92d3-5325dc518ba394ab9bdf-6449-427f-9b8a-0c016c00b9c0f972a207-9c83-4d5b-8167-f36817532a6be613e100-1f86-46f3-92d3-5325dc518ba3c57d5546-7b4f-4aff-87b8-17f0019fa4d06dbbf627-809c-401d-a28e-1bcae82182dae613e100-1f86-46f3-92d3-5325dc518ba3c57d5546-7b4f-4aff-87b8-17f0019fa4d02fc9571b-6492-4346-8572-2b979ec37dbb91de105a-9a37-42c3-9876-661aa9e55b85c57d5546-7b4f-4aff-87b8-17f0019fa4d02fc9571b-6492-4346-8572-2b979ec37dbb545e2578-b977-44e8-bbb3-5c9128d4b42b8240fbd7-3424-4e10-b648-418ab7b61ade2fc9571b-6492-4346-8572-2b979ec37dbb545e2578-b977-44e8-bbb3-5c9128d4b42b6a4be62b-40fb-45f5-a3a1-dc72afd8263ff057ff9e-8d97-44c8-a6f1-5450da71997e545e2578-b977-44e8-bbb3-5c9128d4b42b6a4be62b-40fb-45f5-a3a1-dc72afd8263faa9dc7bd-8c82-4729-89d0-901e5ef7a0b481806bca-e76c-4135-a70f-c71cac70a2a26a4be62b-40fb-45f5-a3a1-dc72afd8263faa9dc7bd-8c82-4729-89d0-901e5ef7a0b41b7ae100-785f-4359-87a8-4bc5a956ea125ef342d7-55fb-4ba7-a8d2-d9c7b28f4cd3aa9dc7bd-8c82-4729-89d0-901e5ef7a0b41b7ae100-785f-4359-87a8-4bc5a956ea127985cce1-8106-4383-b644-b7a90761e15144773f7e-cc02-4f62-8712-14d0b6b40ece1b7ae100-785f-4359-87a8-4bc5a956ea127985cce1-8106-4383-b644-b7a90761e151f9dbf27a-9f9a-4857-81a9-ab63022878ef3d51f1b8-3081-469a-bc0b-e23c2d3370ba7985cce1-8106-4383-b644-b7a90761e151f9dbf27a-9f9a-4857-81a9-ab63022878efafcaeb29-68b4-41c8-958d-aa29e3888a26e88fbb70-7c8d-4a76-8801-c89d29170d2ef9dbf27a-9f9a-4857-81a9-ab63022878efafcaeb29-68b4-41c8-958d-aa29e3888a26b0609944-c768-4c46-a1e6-ec3d99b3db520a6e325c-0a6e-45f7-89aa-134110110febafcaeb29-68b4-41c8-958d-aa29e3888a26b0609944-c768-4c46-a1e6-ec3d99b3db52642dc47a-ebe9-4238-91b7-49108fb27d9d12bff573-c24c-4d75-9f54-32053f67f691b0609944-c768-4c46-a1e6-ec3d99b3db52642dc47a-ebe9-4238-91b7-49108fb27d9db510e55b-acd4-4648-8798-fbefa8415295144d95a9-b936-4120-9f04-47cf807d9b68642dc47a-ebe9-4238-91b7-49108fb27d9db510e55b-acd4-4648-8798-fbefa8415295b510e55b-acd4-4648-8798-fbefa8415295d669b187-dc34-4204-aef4-5fb073494023d669b187-dc34-4204-aef4-5fb0734940238d63b8de-05fd-4b7b-a77c-cf8243457afe5cb655e1-0cab-4f7b-af3e-574df42d80dacb5035c9-4b07-40f5-8923-813340844d7b8d63b8de-05fd-4b7b-a77c-cf8243457afe5cb655e1-0cab-4f7b-af3e-574df42d80da4fd8f2da-a5d4-4b44-969b-c0642dcbc8141274e06e-b4bf-4360-94c1-16dbdaa8cfb45cb655e1-0cab-4f7b-af3e-574df42d80da4fd8f2da-a5d4-4b44-969b-c0642dcbc8143f04e00d-a16d-454b-814d-c6728cafcab8adc41838-d13f-4bcf-a86e-80f7def007264fd8f2da-a5d4-4b44-969b-c0642dcbc8143f04e00d-a16d-454b-814d-c6728cafcab86ee8edfa-7dbd-4749-944b-e3e606bd294de4e3f98b-d055-418c-8f1a-7d503e1840d33f04e00d-a16d-454b-814d-c6728cafcab86ee8edfa-7dbd-4749-944b-e3e606bd294d4c797270-f664-4ec2-9b1e-897a258c7ce0c26e5ab5-76cb-47fd-b420-e422a92e4db86ee8edfa-7dbd-4749-944b-e3e606bd294d4c797270-f664-4ec2-9b1e-897a258c7ce083a20a32-2b09-46c1-af3e-8fc0bd85a7e06b445887-e7fe-4796-b288-c56d36cff4d14c797270-f664-4ec2-9b1e-897a258c7ce083a20a32-2b09-46c1-af3e-8fc0bd85a7e083a20a32-2b09-46c1-af3e-8fc0bd85a7e05360b060-8983-4c69-814b-1e0729c89f135360b060-8983-4c69-814b-1e0729c89f13b919d8f2-8fc5-4017-b73c-eedac04aa9deb919d8f2-8fc5-4017-b73c-eedac04aa9deafbe2129-f329-4bf0-984e-82798133a98bafbe2129-f329-4bf0-984e-82798133a98b04fe236f-6143-43dc-ae4e-564e25ccf7bb04fe236f-6143-43dc-ae4e-564e25ccf7bb03805b73-ee54-4f92-bf26-40c899ba66ee03805b73-ee54-4f92-bf26-40c899ba66ee38294afa-81fb-40e8-a0e0-ae33c81f7ed038294afa-81fb-40e8-a0e0-ae33c81f7ed001eb067d-605a-48ce-a5f4-416c9dd6ca7801eb067d-605a-48ce-a5f4-416c9dd6ca78ad7784fe-d881-4cda-ac68-9831a2cc4645ad7784fe-d881-4cda-ac68-9831a2cc4645c73619cb-9610-4696-aac3-1493c0ff06f6c73619cb-9610-4696-aac3-1493c0ff06f6e141c950-17fd-4887-8382-52fb3e19bc71e141c950-17fd-4887-8382-52fb3e19bc711899e1e7-b2d1-4c5d-aaec-9f1a1699ac031899e1e7-b2d1-4c5d-aaec-9f1a1699ac03e93f6e12-e934-47fb-b983-2e5155fdefb2e93f6e12-e934-47fb-b983-2e5155fdefb2754b69a8-b571-4478-b6b1-5278ee12b8d6754b69a8-b571-4478-b6b1-5278ee12b8d67e3934cf-6564-4baa-b06e-61ddd36827737e3934cf-6564-4baa-b06e-61ddd36827733def7a8f-7c44-483d-b8f0-bbaef7de15243def7a8f-7c44-483d-b8f0-bbaef7de1524c9cd3612-8b66-4a6f-b61a-4426f245c1726b445887-e7fe-4796-b288-c56d36cf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pty:16Crno-miR-188-5prno-miR-188-5pempty:17Urno-miR-188-5prno-miR-188-5pempty:18Urno-miR-188-5prno-miR-188-5pempty:19Grno-miR-188-5prno-miR-188-5pempty:20Crno-miR-188-5prno-miR-188-5pempty:21Arno-miR-188-5prno-miR-188-5pempty:22Urno-miR-188-5prno-miR-188-5pempty:23Grno-miR-188-5prno-miR-188-5pempty:24Grno-miR-188-5prno-miR-188-5pempty:25Urno-miR-188-5prno-miR-188-5pempty:26Grno-miR-188-5prno-miR-188-5pempty:27Grno-miR-188-5prno-miR-188-5pempty:28Arno-miR-188-5prno-miR-188-5pempty:29Grno-miR-188-5prno-miR-188-5pempty:30Grno-miR-188-5prno-miR-188-5pempty:31Grno-miR-188-5pempty:32empty:32Cempty:32empty:33empty:33Gempty:33empty:34empty:34Aempty:34empty:35empty:35Gempty:35empty:36empty:36Cempty:36empty:37empty:37Uempty:37empty:38empty:38Cempty:38empty:39empty:39Uempty:39empty:40empty:40Cempty:40empty:41empty:41Uempty:41empty:42empty:42Gempty:42empty:43empty:43Aempty:43empty:44empty:44Aempty:44empty:45empty:45Aempty:45empty:46empty:46Aempty:46empty:47empty:47Cempty:47empty:48empty:48Uempty:48empty:49empty:49Cempty:49rno-miR-188-3pempty:50Crno-miR-188-3prno-miR-188-3pempty:51Urno-miR-188-3prno-miR-188-3pempty:52Crno-miR-188-3prno-miR-188-3pempty:53Crno-miR-188-3prno-miR-188-3pempty:54Crno-miR-188-3prno-miR-188-3pempty:55Arno-miR-188-3prno-miR-188-3pempty:56Crno-miR-188-3prno-miR-188-3pempty:57Arno-miR-188-3prno-miR-188-3pempty:58Urno-miR-188-3prno-miR-188-3pempty:59Grno-miR-188-3prno-miR-188-3pempty:60Crno-miR-188-3prno-miR-188-3pempty:61Arno-miR-188-3prno-miR-188-3pempty:62Grno-miR-188-3prno-miR-188-3pempty:63Grno-miR-188-3prno-miR-188-3pempty:64Grno-miR-188-3prno-miR-188-3pempty:65Urno-miR-188-3prno-miR-188-3pempty:66Urno-miR-188-3prno-miR-188-3pempty:67Urno-miR-188-3prno-miR-188-3pempty:68Grno-miR-188-3prno-miR-188-3pempty:69Crno-miR-188-3pempty:70empty:70Aempty:70empty:71empty:71Gempty:71empty:72empty:72Gempty:72empty:73empty:73Aempty:73empty:74empty:74Uempty:74empty:75empty:75Gempty:75empty:76empty:76Gempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Aempty:79empty:80empty:80Gempty:801020304050607080

References

Authors Journal Year Pubmed link Title
1 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.
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