Precursor miRBase

hsa-mir-543 (MI0005565)

Accession MI0005565
Name hsa-mir-543
similar to following miRCarta precursors hsa-579.1
Organism Homo sapiens
Genome GRCh38.p10
Location chr14:101,031,987-101,032,064 (+)
miRNA hsa-miR-543
Sequence (5' -> 3')
(78 nts)
UACUUAAUGAGAAGUUGCCCGUGUUUUUUUCGCUUUAUUUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUC
MFE -24.00 kcal/mol
first miRBase version 10.0
last miRBase version 21.0
Clusters (10 kb)
(19 precursors)
hsa-mir-379
hsa-mir-411
hsa-mir-299
hsa-mir-380
hsa-mir-1197
hsa-mir-323a
hsa-mir-758
hsa-mir-329-1
hsa-mir-329-2
hsa-mir-494
hsa-mir-1193
hsa-mir-543
hsa-mir-495
hsa-mir-376c
hsa-mir-376a-2
hsa-mir-654
hsa-mir-376b
hsa-mir-376a-1
hsa-mir-300
Family mir-329 (MIPF0000110)
Experiments
experiment Pubmed link
RAKE 16954537
External DBs
Gene symbol MIR543
NCBI Gene 100126335

External tools

Links
HMDD

Predicted Structure

c2b393d3-807a-426a-b5c2-b5a92e3b48b1c2c9f0e9-83b4-4509-b92f-e0f2bd4d9431f8ad37ad-8a78-439f-830c-d1a8f8855d9abdeb80b3-3a2a-45c5-abbb-031acac74366c2b393d3-807a-426a-b5c2-b5a92e3b48b1f8ad37ad-8a78-439f-830c-d1a8f8855d9ac3c44954-53b5-4d92-9b99-11f5a84ac5d911f4a48d-58ae-4108-bb45-5a1cea96f019f8ad37ad-8a78-439f-830c-d1a8f8855d9ac3c44954-53b5-4d92-9b99-11f5a84ac5d94bb6eccd-6261-4198-b589-5c338f5d8fdac196b1ac-6ac2-410c-96a1-c01e52f4cf23c3c44954-53b5-4d92-9b99-11f5a84ac5d94bb6eccd-6261-4198-b589-5c338f5d8fda4bb6eccd-6261-4198-b589-5c338f5d8fda7910dc13-7b2d-4d79-8490-44abf694e5fb4bd32fc6-8a27-4ee5-a0ab-6afe7999f4fb8c7d4a53-daf9-4e11-9447-36c7e6e5a6517910dc13-7b2d-4d79-8490-44abf694e5fb4bd32fc6-8a27-4ee5-a0ab-6afe7999f4fbb926631a-83a1-4b1d-b6ac-356464a3aa92b5aac3d7-98a5-4e9a-b487-057e2341a9ad4bd32fc6-8a27-4ee5-a0ab-6afe7999f4fbb926631a-83a1-4b1d-b6ac-356464a3aa92b926631a-83a1-4b1d-b6ac-356464a3aa921ee7a11c-edf7-42e0-a362-9ca6f472c20f5ce2466b-1f23-4eed-93a0-01b6b3fe4c56e8222698-cb4c-4af1-9318-7778f47410811ee7a11c-edf7-42e0-a362-9ca6f472c20f5ce2466b-1f23-4eed-93a0-01b6b3fe4c56827684ab-feac-4526-a54f-ac78301d3df03b8ecf9d-a45c-4338-99b3-5181d2add5d55ce2466b-1f23-4eed-93a0-01b6b3fe4c56827684ab-feac-4526-a54f-ac78301d3df080d415c8-750b-4af6-97cd-40a54cf3335addeac8e4-8766-4d10-bba5-f78634f6a00c827684ab-feac-4526-a54f-ac78301d3df080d415c8-750b-4af6-97cd-40a54cf3335aa3dd0f5b-a3fe-40f2-b00f-06664d290f74f3d229b9-4c7b-41be-84db-01c97693777c80d415c8-750b-4af6-97cd-40a54cf3335aa3dd0f5b-a3fe-40f2-b00f-06664d290f7467b61261-93e4-459b-8d13-8cab4218f703ad703668-1141-49c1-a1af-cd59018034f8a3dd0f5b-a3fe-40f2-b00f-06664d290f7467b61261-93e4-459b-8d13-8cab4218f703f470b7ff-ccad-40bd-9188-ba3b428c4f0e155e11db-fc5e-4e3f-94db-ade2b5e980aa67b61261-93e4-459b-8d13-8cab4218f703f470b7ff-ccad-40bd-9188-ba3b428c4f0e289dce6d-b3dd-48a9-9918-6832c8c503cf51eb62bc-37cf-4848-96c4-e95a0fe68f08f470b7ff-ccad-40bd-9188-ba3b428c4f0e289dce6d-b3dd-48a9-9918-6832c8c503cf289dce6d-b3dd-48a9-9918-6832c8c503cfa131bdcd-ddc4-4687-ac80-1e4894173e06b7d42547-6aa5-4346-a06a-ca9eea4b2452450b97d2-6079-41e7-8ef7-923f92806c44a131bdcd-ddc4-4687-ac80-1e4894173e06b7d42547-6aa5-4346-a06a-ca9eea4b245220dd8599-e710-436c-9338-f9fdabfb6bf6a42c5880-6bb0-4e17-9b85-9f5de96149feb7d42547-6aa5-4346-a06a-ca9eea4b245220dd8599-e710-436c-9338-f9fdabfb6bf63d87dd68-a767-4818-86c3-3772d2082ad0e0df310a-cc38-45af-9e44-7914419259a620dd8599-e710-436c-9338-f9fdabfb6bf63d87dd68-a767-4818-86c3-3772d2082ad0c25cd423-4def-4ddc-a628-3b7975b94e4839cdafa2-f7b2-482a-a124-8dd0b502e84d3d87dd68-a767-4818-86c3-3772d2082ad0c25cd423-4def-4ddc-a628-3b7975b94e48e07d4b82-801f-418b-9980-52cd7c168ba2119e6308-ec29-4ab1-8570-2a23309dffe3c25cd423-4def-4ddc-a628-3b7975b94e48e07d4b82-801f-418b-9980-52cd7c168ba2b0a51215-4bb9-47ed-8a79-2f64507e5ebd84052ca9-50f5-4e65-bf33-aea64d426d52e07d4b82-801f-418b-9980-52cd7c168ba2b0a51215-4bb9-47ed-8a79-2f64507e5ebd4329c3fb-30b6-414b-a749-76afcfc8ff0898e45342-e5fd-4cb4-96a9-3a6124725a1eb0a51215-4bb9-47ed-8a79-2f64507e5ebd4329c3fb-30b6-414b-a749-76afcfc8ff084329c3fb-30b6-414b-a749-76afcfc8ff08ce37c9b4-83f6-48dc-b3c0-7440b5e2cb2ee092b5f6-c00c-452f-9f98-8b3935f16820398e9193-12a6-45bd-a0fe-129636b82e60ce37c9b4-83f6-48dc-b3c0-7440b5e2cb2ee092b5f6-c00c-452f-9f98-8b3935f16820c0be8084-f818-451e-8e94-bca477da2b1895c92bee-6493-47f4-941c-164040be2629e092b5f6-c00c-452f-9f98-8b3935f16820c0be8084-f818-451e-8e94-bca477da2b1812ad2504-b040-4bfa-9a4c-ef13b4d9557a3d8daebf-e464-4e48-9269-37db23d69b75c0be8084-f818-451e-8e94-bca477da2b1812ad2504-b040-4bfa-9a4c-ef13b4d9557a40d8de94-5b40-4323-a2bc-c66ecfc8cc9e822672e2-567e-45f0-9568-766219eee01912ad2504-b040-4bfa-9a4c-ef13b4d9557a40d8de94-5b40-4323-a2bc-c66ecfc8cc9e40d8de94-5b40-4323-a2bc-c66ecfc8cc9e4a05229f-936c-45b1-a491-24acf8956d42196de47d-7057-4707-a440-1502ece2c504f1452f8e-b287-4ada-9ada-0b7ddf152fec4a05229f-936c-45b1-a491-24acf8956d42196de47d-7057-4707-a440-1502ece2c5042eeba5f3-5856-4a72-a5f3-7bdd099d440d22d65b14-a138-437d-87f7-fda5059b6609196de47d-7057-4707-a440-1502ece2c5042eeba5f3-5856-4a72-a5f3-7bdd099d440d1933742d-d79f-4824-b084-9fd99e482353418679c4-eb6c-4887-bc84-f4cc871e90a42eeba5f3-5856-4a72-a5f3-7bdd099d440d1933742d-d79f-4824-b084-9fd99e482353a7319a87-815f-4191-80df-8796233a198da49a9dfd-4ba7-4f03-afb1-27cc02bb87331933742d-d79f-4824-b084-9fd99e482353a7319a87-815f-4191-80df-8796233a198da7319a87-815f-4191-80df-8796233a198d6d3a547e-d13d-4f15-83a7-b9847e28469c6d3a547e-d13d-4f15-83a7-b9847e28469ca820e663-bf43-43dd-8ccc-77aac032a4c3a820e663-bf43-43dd-8ccc-77aac032a4c3e93ae7d7-889b-473b-ac14-5e601cb3f7e0e93ae7d7-889b-473b-ac14-5e601cb3f7e0578f931e-5b67-4fd5-9d54-db1c03629a67578f931e-5b67-4fd5-9d54-db1c03629a6722db947d-023d-454f-a276-739f1c79d48c22db947d-023d-454f-a276-739f1c79d48c185eb2ed-6c67-4e49-ae34-782b4bc4b62a185eb2ed-6c67-4e49-ae34-782b4bc4b62ab814d30e-6473-45bb-adac-49106ba8f6d1a49a9dfd-4ba7-4f03-afb1-27cc02bb8733a7319a87-815f-4191-80df-8796233a198db814d30e-6473-45bb-adac-49106ba8f6d1a49a9dfd-4ba7-4f03-afb1-27cc02bb8733418679c4-eb6c-4887-bc84-f4cc871e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e3d986e5b5aac3d7-98a5-4e9a-b487-057e2341a9adfdd82d2b-52f6-4585-94bc-af7cc42d2a5cempty:1empty:1Uempty:1empty:2empty:2Aempty:2empty:3empty:3Cempty:3empty:4empty:4Uempty:4empty:5empty:5Uempty:5empty:6empty:6Aempty:6empty:7empty:7Aempty:7empty:8empty:8Uempty:8empty:9empty:9Gempty:9empty:10empty:10Aempty:10empty:11empty:11Gempty:11empty:12empty:12Aempty:12empty:13empty:13Aempty:13empty:14empty:14Gempty:14empty:15empty:15Uempty:15empty:16empty:16Uempty:16empty:17empty:17Gempty:17empty:18empty:18Cempty:18empty:19empty:19Cempty:19empty:20empty:20Cempty:20empty:21empty:21Gempty:21empty:22empty:22Uempty:22empty:23empty:23Gempty:23empty:24empty:24Uempty:24empty:25empty:25Uempty:25empty:26empty:26Uempty:26empty:27empty:27Uempty:27empty:28empty:28Uempty:28empty:29empty:29Uempty:29empty:30empty:30Uempty:30empty:31empty:31Cempty:31empty:32empty:32Gempty:32empty:33empty:33Cempty:33empty:34empty:34Uempty:34empty:35empty:35Uempty:35empty:36empty:36Uempty:36empty:37empty:37Aempty:37empty:38empty:38Uempty:38empty:39empty:39Uempty:39empty:40empty:40Uempty:40empty:41empty:41Gempty:41empty:42empty:42Uempty:42empty:43empty:43Gempty:43empty:44empty:44Aempty:44empty:45empty:45Cempty:45empty:46empty:46Gempty:46hsa-miR-543empty:47Ahsa-miR-543hsa-miR-543empty:48Ahsa-miR-543hsa-miR-543empty:49Ahsa-miR-543hsa-miR-543empty:50Chsa-miR-543hsa-miR-543empty:51Ahsa-miR-543hsa-miR-543empty:52Uhsa-miR-543hsa-miR-543empty:53Uhsa-miR-543hsa-miR-543empty:54Chsa-miR-543hsa-miR-543empty:55Ghsa-miR-543hsa-miR-543empty:56Chsa-miR-543hsa-miR-543empty:57Ghsa-miR-543hsa-miR-543empty:58Ghsa-miR-543hsa-miR-543empty:59Uhsa-miR-543hsa-miR-543empty:60Ghsa-miR-543hsa-miR-543empty:61Chsa-miR-543hsa-miR-543empty:62Ahsa-miR-543hsa-miR-543empty:63Chsa-miR-543hsa-miR-543empty:64Uhsa-miR-543hsa-miR-543empty:65Uhsa-miR-543hsa-miR-543empty:66Chsa-miR-543hsa-miR-543empty:67Uhsa-miR-543hsa-miR-543empty:68Uhsa-miR-543empty:69empty:69Uempty:69empty:70empty:70Uempty:70empty:71empty:71Uempty:71empty:72empty:72Cempty:72empty:73empty:73Aempty:73empty:74empty:74Gempty:74empty:75empty:75Uempty:75empty:76empty:76Aempty:76empty:77empty:77Uempty:77empty:78empty:78Cempty:7810203040506070
UACUUAAUGAGAAGUUGCCCGUGUUUUUUUCGCUUUAUUUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUC0100k200k300k400k
RPMMone mismatchno mismatch
UACUUAAUGAGAAGUUGCCCGUGUUUUUUUCGCUUUAUUUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUC00.5M1M1.5M2M
number of readsone mismatchno mismatch

References

Authors Journal Year Pubmed link Title
1 Berezikov et al. Genome Res. 2006 16954537 Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis.
2 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
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