Precursor miRBase

xtr-mir-200a (MI0004945)

Accession MI0004945
Name xtr-mir-200a
similar to following miRCarta precursors xtr-26824.1
Organism Xenopus tropicalis
Genome JGI 4.2
Location GL173621.1:54,405-54,493 (+)
miRNA xtr-miR-200a
Sequence (5' -> 3')
(89 nts)
UGGUCCUCUAUGGACAUCUUACUAGACAGUGCUGGAUUUAUUUUAUCUUUUCUAACACUGUCUGGUAACGAUGUUUAAAGAGUGAGCCA
MFE -40.10 kcal/mol
first miRBase version 8.1
last miRBase version 21.0
Clusters (10 kb)
(3 precursors)
xtr-mir-200b
xtr-mir-200a
xtr-mir-429
Family mir-8 (MIPF0000019)
Experiments
experiment Pubmed link
Northern blot 18032731

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Tang et al. Genome Res. 2008 18032731 Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation.