Precursor miRBase

xtr-mir-18a (MI0004893)

Accession MI0004893
Name xtr-mir-18a
similar to following miRCarta precursors xtr-262-389.1
Organism Xenopus tropicalis
Genome JGI 4.2
Location GL173376.1:85,669-85,755 (-)
miRNA xtr-miR-18a-5p
miRNA xtr-miR-18a-3p
Sequence (5' -> 3')
(87 nts)
GUGCUUUUUGUCCUAAGGUGCAUCUAGUGCAGAUAGUGAAGUAGAUUAGCAUCUACUGCCCUAAGUGCUCCUUCUGGCAUAAAAAGU
MFE -28.80 kcal/mol
first miRBase version 8.1
last miRBase version 21.0
Clusters (10 kb)
(6 precursors)
xtr-mir-92a-1
xtr-mir-19b-2
xtr-mir-20a
xtr-mir-19a
xtr-mir-18a
xtr-mir-17
Family mir-17 (MIPF0000001)
Experiments
experiment Pubmed link
Northern blot 18032731

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Tang et al. Genome Res. 2008 18032731 Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation.