Precursor miRBase

xtr-mir-1a-1 (MI0004789)

Accession MI0004789
Name xtr-mir-1a-1
similar to following miRCarta precursors xtr-307.1
Organism Xenopus tropicalis
Genome JGI 4.2
Location GL172720.1:2,261,582-2,261,665 (-)
miRNA xtr-miR-1a
Sequence (5' -> 3')
(84 nts)
ACCUGUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUCAGG
MFE -31.80 kcal/mol
first miRBase version 8.1
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
xtr-mir-133a
xtr-mir-1a-1
Family mir-1 (MIPF0000038)
Experiments
experiment Pubmed link
Northern blot 18032731

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Tang et al. Genome Res. 2008 18032731 Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation.