Precursor miRBase

rno-mir-409a (MI0003550)

Accession MI0003550
Name rno-mir-409a
similar to following miRCarta precursors rno-329-29561.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,055,776-143,055,852 (+)
miRNA rno-miR-409a-5p
miRNA rno-miR-409a-3p
Sequence (5' -> 3')
(77 nts)
GGUACUCGGAGAGAGGUUACCCGAGCAACUUUGCAUCUGGAGGACGAAUGUUGCUCGGUGAACCCCUUUUCGGUAUC
MFE -35.70 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Clusters (10 kb)
(16 precursors)
rno-mir-3592
rno-mir-382
rno-mir-134
rno-mir-668
rno-mir-485
rno-mir-154
rno-mir-496
rno-mir-377
rno-mir-541
rno-mir-409b
rno-mir-409a
rno-mir-412
rno-mir-3578
rno-mir-369
rno-mir-410
rno-mir-3072
Family mir-154 (MIPF0000018)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir409
NCBI Gene 100314257

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.