Precursor miRBase

rno-mir-485 (MI0003549)

Accession MI0003549
Name rno-mir-485
similar to following miRCarta precursors rno-730-29555.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,047,656-143,047,734 (+)
miRNA rno-miR-485-5p
miRNA rno-miR-485-3p
Sequence (5' -> 3')
(79 nts)
GAUACUUGGAGAGAGGCUGGCCGUGAUGAAUUCGAUUCAUCUAAACGAGUCAUACACGGCUCUCCUCUCUUCUAGUGUC
MFE -40.40 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Clusters (10 kb)
(21 precursors)
rno-mir-381
rno-mir-487b
rno-mir-3576
rno-mir-539
rno-mir-6331
rno-mir-544
rno-mir-3592
rno-mir-382
rno-mir-134
rno-mir-668
rno-mir-485
rno-mir-154
rno-mir-496
rno-mir-377
rno-mir-541
rno-mir-409b
rno-mir-409a
rno-mir-412
rno-mir-3578
rno-mir-369
rno-mir-410
Family mir-485 (MIPF0000201)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir485
NCBI Gene 100314086

Predicted Structure

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References

Authors Journal Year Pubmed link Title
1 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
2 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
3 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.
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