Precursor miRBase

rno-mir-494 (MI0003542)

Accession MI0003542
Name rno-mir-494
similar to following miRCarta precursors rno-1315-529.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,026,541-143,026,623 (+)
miRNA rno-miR-494-5p
miRNA rno-miR-494-3p
Sequence (5' -> 3')
(83 nts)
UGAUACUUGAAGGAGAGGUUGUCCGUGUUGUCUUCUCUUUAUUUAUGAUGAAACAUACACGGGAAACCUCUUUUUUAGUAUCA
MFE -35.50 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Clusters (10 kb)
(21 precursors)
rno-mir-379
rno-mir-411
rno-mir-299b
rno-mir-299a
rno-mir-3579
rno-mir-380
rno-mir-323
rno-mir-758
rno-mir-329
rno-mir-494
rno-mir-679
rno-mir-1193
rno-mir-666
rno-mir-543
rno-mir-495
rno-mir-667
rno-mir-376c
rno-mir-376b
rno-mir-3595
rno-mir-376a
rno-mir-300
Family mir-154 (MIPF0000018)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir494
NCBI Gene 100314082

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.