| Accession | MI0003525 | ||||||
| Name | rno-mir-543 | ||||||
| similar to following miRCarta precursors | rno-25228-579.1 | ||||||
| Organism | Rattus norvegicus | ||||||
| Genome | Rnor_5.0 | ||||||
| Location |
chr6:143,028,831-143,028,910 (+) |
||||||
| miRNA | rno-miR-543-5p | ||||||
| miRNA | rno-miR-543-3p | ||||||
| Sequence (5' -> 3') (80 nts) |
GGUGCUUAAUGAGAAGUUGCCCGCGUGUUUUUCGCUUUAUAUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGCAUC | ||||||
| MFE | -34.90 kcal/mol | ||||||
| first miRBase version | 8.0 | ||||||
| last miRBase version | 21.0 | ||||||
| Clusters (10 kb) (21 precursors) |
rno-mir-379
rno-mir-411 rno-mir-299b rno-mir-299a rno-mir-3579 rno-mir-380 rno-mir-323 rno-mir-758 rno-mir-329 rno-mir-494 rno-mir-679 rno-mir-1193 rno-mir-666 rno-mir-543 rno-mir-495 rno-mir-667 rno-mir-376c rno-mir-376b rno-mir-3595 rno-mir-376a rno-mir-300 |
||||||
| Family | mir-329 (MIPF0000110) | ||||||
| Experiments |
|
||||||
| External DBs |
|
| Authors | Journal | Year | Pubmed link | Title | |
|---|---|---|---|---|---|
| 1 | Sewer et al. | BMC Bioinformatics | 2005 | 16274478 | Identification of clustered microRNAs using an ab initio prediction method. |
| 2 | Landgraf et al. | Cell | 2007 | 17604727 | A mammalian microRNA expression atlas based on small RNA library sequencing. |
| 3 | Linsen et al. | BMC Genomics | 2010 | 20403161 | Small RNA expression and strain specificity in the rat. |