| Accession | MI0003522 | ||||||||||
| Name | mmu-mir-542 | ||||||||||
| similar to following miRCarta precursors | mmu-25650-136.1 | ||||||||||
| Organism | Mus musculus | ||||||||||
| Genome | GRCm38.p5 | ||||||||||
| Location |
chrX:53,049,403-53,049,487 (-) |
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| miRNA | mmu-miR-542-5p | ||||||||||
| miRNA | mmu-miR-542-3p | ||||||||||
| Sequence (5' -> 3') (85 nts) |
GGAUCUCAGACGUCUCGGGGAUCAUCAUGUCACGAGAUACCACUGUGCCCUUGUGACAGAUUGAUAACUGAAAGGUCUGGGAGCC | ||||||||||
| MFE | -36.90 kcal/mol | ||||||||||
| first miRBase version | 8.0 | ||||||||||
| last miRBase version | 21.0 | ||||||||||
| Clusters (10 kb) (7 precursors) |
mmu-mir-450b
mmu-mir-450a-1 mmu-mir-450a-2 mmu-mir-542 mmu-mir-351 mmu-mir-503 mmu-mir-322 |
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| Family | mir-542 (MIPF0000185) | ||||||||||
| Experiments |
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| External DBs |
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| Authors | Journal | Year | Pubmed link | Title | |
|---|---|---|---|---|---|
| 1 | Sewer et al. | BMC Bioinformatics | 2005 | 16274478 | Identification of clustered microRNAs using an ab initio prediction method. |
| 2 | Takada et al. | Nucleic Acids Res. | 2006 | 16973894 | Mouse microRNA profiles determined with a new and sensitive cloning method. |
| 3 | Mineno et al. | Nucleic Acids Res. | 2006 | 16582102 | The expression profile of microRNAs in mouse embryos. |
| 4 | Landgraf et al. | Cell | 2007 | 17604727 | A mammalian microRNA expression atlas based on small RNA library sequencing. |
| 5 | Chiang et al. | Genes Dev. | 2010 | 20413612 | Mammalian microRNAs: experimental evaluation of novel and previously annotated genes. |
| 6 | Ahn et al. | Mol. Hum. Reprod. | 2010 | 20215419 | MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing. |