Precursor miRBase

rno-mir-501 (MI0003480)

Accession MI0003480
Name rno-mir-501
similar to following miRCarta precursors rno-25621-25620.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chrX:16,902,998-16,903,081 (+)
miRNA rno-miR-501-5p
miRNA rno-miR-501-3p
Sequence (5' -> 3')
(84 nts)
GCUCGUCCUCUCUAAUCCUUUGUCCCUGGGUGAAAAUGCUAUUUGUAUGCAAUGCACCCGGGCAAGGAUUUGGGGAAGGUAAGC
MFE -33.40 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Clusters (10 kb)
(6 precursors)
rno-mir-532
rno-mir-188
rno-mir-362
rno-mir-3560
rno-mir-501
rno-mir-500
Family mir-500 (MIPF0000139)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir501
NCBI Gene 100314166

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.