Precursor miRBase

ssc-mir-204 (MI0002458)

Accession MI0002458
Name ssc-mir-204
similar to following miRCarta precursors ssc-296.1
Organism Sus scrofa
Genome Sscrofa10.2
Location chr1:250,527,017-250,527,125 (-)
miRNA ssc-miR-204
Sequence (5' -> 3')
(109 nts)
GGCUACAGUCCUUCUCAUGUGACUCGUGGACUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGAGGCUGGGAAGGCAAAGGGACGUUCAAUUGUCAUCACUGGC
MFE -42.10 kcal/mol
first miRBase version 7.0
last miRBase version 21.0
Clusters (10 kb)
(1 precursors)
ssc-mir-204
Family mir-204 (MIPF0000042)
Experiments
experiment Pubmed link
Illumina 24499489 19917043 21312241
454 19196471
External DBs
Gene symbol MIR204
NCBI Gene 100316594

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Wernersson et al. BMC Genomics 2005 15885146 Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing.
2 Reddy et al. BMC Genomics 2009 19196471 Cloning, characterization and expression analysis of porcine microRNAs.
3 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
4 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
5 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.