Precursor miRBase

ssc-let-7c (MI0002445)

Accession MI0002445
Name ssc-let-7c
similar to following miRCarta precursors ssc-37.1
potential naming conflicts with ssc-let-7c (MIMAT0002151)
Organism Sus scrofa
Genome Sscrofa10.2
Location chr13:191,559,336-191,559,429 (+)
miRNA ssc-let-7c
Sequence (5' -> 3')
(94 nts)
UGUGUGCAUCCGGGUUGAGGUAGUAGGUUGUAUGGUUUAGAGUUACACCGUGGGAGUUAACUGUACAACCUUCUAGCUUUCCUUGGAGCACACU
MFE -42.70 kcal/mol
first miRBase version 7.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-mir-99a
ssc-let-7c
Family let-7 (MIPF0000002)
Experiments
experiment Pubmed link
Illumina 21312241 24499489 19917043
cloned 20180025
454 19196471
External DBs
Gene symbol MIRLET7C
NCBI Gene 100170412

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Wernersson et al. BMC Genomics 2005 15885146 Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing.
2 Reddy et al. BMC Genomics 2009 19196471 Cloning, characterization and expression analysis of porcine microRNAs.
3 Cho et al. Mol. Biol. Rep. 2010 20180025 Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue.
4 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
5 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
6 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.