Precursor miRBase

ssc-mir-181c (MI0002438)

Accession MI0002438
Name ssc-mir-181c
similar to following miRCarta precursors ssc-165.1
Organism Sus scrofa
Genome Sscrofa10.2
Location chr2:65,553,664-65,553,750 (-)
miRNA ssc-miR-181c
Sequence (5' -> 3')
(87 nts)
CAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGGCAAACCAUCGACCGUUGAGUGGACCCCGAGGCCUGGA
MFE -43.40 kcal/mol
first miRBase version 7.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-mir-181d
ssc-mir-181c
Family mir-181 (MIPF0000007)
Experiments
experiment Pubmed link
Illumina 21312241 24499489 19917043
External DBs
Gene symbol MIR181C
NCBI Gene 100316599

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Wernersson et al. BMC Genomics 2005 15885146 Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing.
2 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
3 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
4 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.