Precursor miRBase

rno-mir-130a (MI0000903)

Accession MI0000903
Name rno-mir-130a
similar to following miRCarta precursors rno-622-24334.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr3:78,661,697-78,661,784 (-)
miRNA rno-miR-130a-5p
miRNA rno-miR-130a-3p
Sequence (5' -> 3')
(88 nts)
UGCUGCUGGCCGGAGCUCUUUUCACAUUGUGCUACUGUCUACACGUGUACCGAGCAGUGCAAUGUUAAAAGGGCAUCGGCCUUGUAGU
MFE -42.60 kcal/mol
first miRBase version 3.1
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
rno-mir-130a
rno-mir-3590
Family mir-130 (MIPF0000034)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir130a
NCBI Gene 100314238

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Miska et al. Genome Biol. 2004 15345052 Microarray analysis of microRNA expression in the developing mammalian brain.
2 Kim et al. Proc. Natl. Acad. Sci. U.S.A. 2004 14691248 Identification of many microRNAs that copurify with polyribosomes in mammalian neurons.
3 Watanabe et al. Genes Dev. 2006 16766679 Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.
4 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
5 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.