Precursor miRBase

hsa-mir-31 (MI0000089)

Accession MI0000089
Name hsa-mir-31
similar to following miRCarta precursors hsa-360-521.1
Organism Homo sapiens
Genome GRCh38.p10
Location chr9:21,512,115-21,512,185 (-)
miRNA hsa-miR-31-5p
miRNA hsa-miR-31-3p
Sequence (5' -> 3')
(71 nts)
GGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGGGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCC
MFE -36.80 kcal/mol
first miRBase version 1.1
last miRBase version 21.0
Clusters (10 kb)
(1 precursors)
hsa-mir-31
Family mir-31 (MIPF0000064)
Experiments
experiment Pubmed link
cloned 17604727
External DBs
Gene symbol MIR31
NCBI Gene 407035

External tools

Links
HMDD

Predicted Structure

33786daf-410f-416c-8c81-ccc2348caa80a70257a2-3b51-495a-9cac-9551b6177ec774d44273-a658-4ef1-ba2c-72ed04bf5f176b00bd71-e57b-449e-bae5-b7c377127e5233786daf-410f-416c-8c81-ccc2348caa8074d44273-a658-4ef1-ba2c-72ed04bf5f172a92ec98-378c-4156-948d-04e18e6e468efe635e36-e4f0-4df4-89e3-3eebc46daa3274d44273-a658-4ef1-ba2c-72ed04bf5f172a92ec98-378c-4156-948d-04e18e6e468efc24d798-896f-4644-8050-e1ef40dd414934b72eb0-b402-4645-bd46-b5b75cb648ba2a92ec98-378c-4156-948d-04e18e6e468efc24d798-896f-4644-8050-e1ef40dd41493c8a752f-21dd-4320-9865-91622aabc234a43bfa77-8d34-45d5-b9de-29bca21e4b02fc24d798-896f-4644-8050-e1ef40dd41493c8a752f-21dd-4320-9865-91622aabc234619cbdcb-6a98-47fc-8a1a-d72a68ab5540ecce6daf-c6ee-44c2-9f78-82d42e00d49f3c8a752f-21dd-4320-9865-91622aabc234619cbdcb-6a98-47fc-8a1a-d72a68ab55402292e0ac-138f-46ee-9178-032cd37dfd2affd8de33-b829-488f-9641-027306c905ae619cbdcb-6a98-47fc-8a1a-d72a68ab55402292e0ac-138f-46ee-9178-032cd37dfd2a2292e0ac-138f-46ee-9178-032cd37dfd2abbfad983-58cf-4e61-b634-26b7bb9942c029cc84a6-de67-4a60-981a-83687d09bcd0d8ffed8e-691d-41ad-94af-f8b6b2e14e5dbbfad983-58cf-4e61-b634-26b7bb9942c029cc84a6-de67-4a60-981a-83687d09bcd0c5e3505e-2daf-41e7-91c5-256932b6fe8d1802172b-2764-4e51-bd7c-3f33851dcff129cc84a6-de67-4a60-981a-83687d09bcd0c5e3505e-2daf-41e7-91c5-256932b6fe8da19fafb0-227a-45df-87f4-cfd21917d32380a59347-3c30-4384-bc47-61f133c8fc10c5e3505e-2daf-41e7-91c5-256932b6fe8da19fafb0-227a-45df-87f4-cfd21917d323028d1d13-e055-480f-a4fd-dc2236d2207fd8284523-741e-4c8f-a450-68c3c00bb7b2a19fafb0-227a-45df-87f4-cfd21917d323028d1d13-e055-480f-a4fd-dc2236d2207f705d8381-b16f-44cc-89f5-d9977e52aad901d62ad7-c7f3-48cc-bd7a-fea35483baa9028d1d13-e055-480f-a4fd-dc2236d2207f705d8381-b16f-44cc-89f5-d9977e52aad9705d8381-b16f-44cc-89f5-d9977e52aad90fcb598a-1b62-45c9-95f3-bd790d0ef7b0cf9174ce-4caa-4d61-809e-f911e4f993fe80901fb5-1faa-4578-9e30-4471323c79fa0fcb598a-1b62-45c9-95f3-bd790d0ef7b0cf9174ce-4caa-4d61-809e-f911e4f993fedf113b94-ec2d-4cfe-b627-07d52eec553bff301227-4d61-423f-be61-10389a8896fdcf9174ce-4caa-4d61-809e-f911e4f993fedf113b94-ec2d-4cfe-b627-07d52eec553bdd5ab6da-8f98-4d94-9eed-ec054d7cb18c19a7d574-7085-45cc-85a2-5b23d47a0ae9df113b94-ec2d-4cfe-b627-07d52eec553bdd5ab6da-8f98-4d94-9eed-ec054d7cb18cdd5ab6da-8f98-4d94-9eed-ec054d7cb18c56bf33c2-7ae1-4054-bc0a-9e95e6da9d76d0095c2f-4d42-4069-8e59-6cda8cafa5e777a217e7-def7-4719-9f72-e1d836a921ee56bf33c2-7ae1-4054-bc0a-9e95e6da9d76d0095c2f-4d42-4069-8e59-6cda8cafa5e7a5864bd1-f158-4479-9dbd-d57df6ed2cefd1e9704c-1f42-4c45-a5fc-474e84c88461d0095c2f-4d42-4069-8e59-6cda8cafa5e7a5864bd1-f158-4479-9dbd-d57df6ed2cefe2abcd88-d39f-4947-8ba1-d3b2b4a5675dd0f03798-099e-409f-a03b-72293abf68a4a5864bd1-f158-4479-9dbd-d57df6ed2cefe2abcd88-d39f-4947-8ba1-d3b2b4a5675dba381955-1eb8-4211-a6d8-5004e5f807c896bec439-4523-4c66-8efd-74da92d488cde2abcd88-d39f-4947-8ba1-d3b2b4a5675dba381955-1eb8-4211-a6d8-5004e5f807c8a0bb2a2e-c696-4966-be35-34e62ce0ac0e242fc51e-b33a-4682-b078-51f512ba67a2ba381955-1eb8-4211-a6d8-5004e5f807c8a0bb2a2e-c696-4966-be35-34e62ce0ac0e28a93be3-80d9-4bd2-9d65-4540b59820cd87154980-3108-4cf6-aa30-c12e4a38d5dfa0bb2a2e-c696-4966-be35-34e62ce0ac0e28a93be3-80d9-4bd2-9d65-4540b59820cd3cd187f4-78a4-46bc-b55c-aec1fc69c04b766d2787-38ae-45af-bafa-467cc9c7199f28a93be3-80d9-4bd2-9d65-4540b59820cd3cd187f4-78a4-46bc-b55c-aec1fc69c04bdd860458-d6de-4e08-a7a1-755dd8f6be4b637d74a9-f746-4fe9-96c6-eba06d695ea33cd187f4-78a4-46bc-b55c-aec1fc69c04bdd860458-d6de-4e08-a7a1-755dd8f6be4bde454bdc-ca73-40f7-83b8-3af3f7549df376adeb82-7ee9-43f6-81e0-e225bc8877a2dd860458-d6de-4e08-a7a1-755dd8f6be4bde454bdc-ca73-40f7-83b8-3af3f7549df3de454bdc-ca73-40f7-83b8-3af3f7549df399fe5069-b9de-48a5-86d1-9f360d6278b6dfca3e5f-d0c6-4456-b482-2af909fece60057ecc16-17c6-4462-ba4b-ed0537bd856d99fe5069-b9de-48a5-86d1-9f360d6278b6dfca3e5f-d0c6-4456-b482-2af909fece60027dc3be-f8eb-4871-b42b-2a85ca82fc8340d4d083-5329-4b4a-8000-ec29a7793dbedfca3e5f-d0c6-4456-b482-2af909fece60027dc3be-f8eb-4871-b42b-2a85ca82fc83757f46ea-7ff8-44d5-b3cb-f57451f2d526a626121e-61f5-485f-afbe-09ace281fe48027dc3be-f8eb-4871-b42b-2a85ca82fc83757f46ea-7ff8-44d5-b3cb-f57451f2d526757f46ea-7ff8-44d5-b3cb-f57451f2d526cb5dc2a6-2023-4fbd-a2e3-b8fe9a93b556cb5dc2a6-2023-4fbd-a2e3-b8fe9a93b556b3e2db8a-cb9f-48c5-848d-b1d5ed206b5eb3e2db8a-cb9f-48c5-848d-b1d5ed206b5e33b1017a-282c-4c04-9af6-095f0aa4fc0833b1017a-282c-4c04-9af6-095f0aa4fc086bf6e481-ba64-43c9-bcfd-ac6cf1b941c56bf6e481-ba64-43c9-bcfd-ac6cf1b941c503944db8-a9e9-4efd-b525-48fd954485c103944db8-a9e9-4efd-b525-48fd954485c150ac4afd-1419-49ba-afe0-39a1fcd0596850ac4afd-1419-49ba-afe0-39a1fcd0596819d0b5d8-0e73-4680-82b7-bfc78ef938f719d0b5d8-0e73-4680-82b7-bfc78ef938f75518c325-9f5d-49d6-9475-26f751326742a626121e-61f5-485f-afbe-09ace281fe48757f46ea-7ff8-44d5-b3cb-f57451f2d5265518c325-9f5d-49d6-9475-26f751326742a626121e-61f5-485f-afbe-09ace281fe4840d4d083-5329-4b4a-8000-ec29a7793dbe027dc3be-f8eb-4871-b42b-2a85ca82fc83a626121e-61f5-485f-afbe-09ace281fe4840d4d083-5329-4b4a-8000-ec29a7793dbe057ecc16-17c6-4462-ba4b-ed0537bd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1-5phsa-miR-31-5pempty:20Ghsa-miR-31-5phsa-miR-31-5pempty:21Ghsa-miR-31-5phsa-miR-31-5pempty:22Chsa-miR-31-5phsa-miR-31-5pempty:23Ahsa-miR-31-5phsa-miR-31-5pempty:24Uhsa-miR-31-5phsa-miR-31-5pempty:25Ahsa-miR-31-5phsa-miR-31-5pempty:26Ghsa-miR-31-5phsa-miR-31-5pempty:27Chsa-miR-31-5phsa-miR-31-5pempty:28Uhsa-miR-31-5pempty:29empty:29Gempty:29empty:30empty:30Uempty:30empty:31empty:31Uempty:31empty:32empty:32Gempty:32empty:33empty:33Aempty:33empty:34empty:34Aempty:34empty:35empty:35Cempty:35empty:36empty:36Uempty:36empty:37empty:37Gempty:37empty:38empty:38Gempty:38empty:39empty:39Gempty:39empty:40empty:40Aempty:40empty:41empty:41Aempty:41empty:42empty:42Cempty:42empty:43empty:43Cempty:43hsa-miR-31-3pempty:44Uhsa-miR-31-3phsa-miR-31-3pempty:45Ghsa-miR-31-3phsa-miR-31-3pempty:46Chsa-miR-31-3phsa-miR-31-3pempty:47Uhsa-miR-31-3phsa-miR-31-3pempty:48Ahsa-miR-31-3phsa-miR-31-3pempty:49Uhsa-miR-31-3phsa-miR-31-3pempty:50Ghsa-miR-31-3phsa-miR-31-3pempty:51Chsa-miR-31-3phsa-miR-31-3pempty:52Chsa-miR-31-3phsa-miR-31-3pempty:53Ahsa-miR-31-3phsa-miR-31-3pempty:54Ahsa-miR-31-3phsa-miR-31-3pempty:55Chsa-miR-31-3phsa-miR-31-3pempty:56Ahsa-miR-31-3phsa-miR-31-3pempty:57Uhsa-miR-31-3phsa-miR-31-3pempty:58Ahsa-miR-31-3phsa-miR-31-3pempty:59Uhsa-miR-31-3phsa-miR-31-3pempty:60Uhsa-miR-31-3phsa-miR-31-3pempty:61Ghsa-miR-31-3phsa-miR-31-3pempty:62Chsa-miR-31-3phsa-miR-31-3pempty:63Chsa-miR-31-3phsa-miR-31-3pempty:64Ahsa-miR-31-3phsa-miR-31-3pempty:65Uhsa-miR-31-3pempty:66empty:66Cempty:66empty:67empty:67Uempty:67empty:68empty:68Uempty:68empty:69empty:69Uempty:69empty:70empty:70Cempty:70empty:71empty:71Cempty:7110203040506070
GGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGGGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCC01M2M3M
RPMMone mismatchno mismatch
GGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGGGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCC010M20M30M
number of readsone mismatchno mismatch

References

Authors Journal Year Pubmed link Title
1 Lagos-Quintana et al. Science 2001 11679670 Identification of novel genes coding for small expressed RNAs.
2 Lui et al. Cancer Res. 2007 17616659 Patterns of known and novel small RNAs in human cervical cancer.
3 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
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