miRNA miRCarta

m-54

Accession m-54
Sequence (5' -> 3') (23 nts)  UAAUACUGCCGGGUAAUGAUGGA
Sequence (5' -> 3') with flanks CUAAUACUGCCGGGUAAUGAUGGAGGC
similar to miRNAs from miRBase bta-miR-200c (MIMAT0003823)
cfa-miR-200c (MIMAT0006664)
cgr-miR-200c (MIMAT0023843)
chi-miR-200c (MIMAT0036047)
eca-miR-200c (MIMAT0012974)
efu-miR-200c (MIMAT0035096)
hsa-miR-200c-3p (MIMAT0000617)
mmu-miR-200c-3p (MIMAT0000657)
oar-miR-200c (MIMAT0030044)
ptr-miR-200c (MIMAT0024051)
rno-miR-200c-3p (MIMAT0000873)
tch-miR-200c-3p (MIMAT0036473)
Organisms Bos taurus
Canis familiaris
Capra hircus
Cricetulus griseus
Eptesicus fuscus
Equus caballus
Homo sapiens
Mus musculus
Ovis aries
Pan troglodytes
Rattus norvegicus
Tupaia chinensis
Located in precursor bta-54.1
Chr5:103,859,438-103,859,460 (-)
Located in precursor cfa-54.1
chr27:38,082,097-38,082,119 (-)
Located in precursor cgr-54.1
NW_003613610.1:4,002,333-4,002,355 (+)
Located in precursor chi-54.1
cluster_5:102,426,551-102,426,573 (-)
Located in precursor eca-54.1
6:34,423,122-34,423,144 (+)
Located in precursor efu-54.1
NW_007370678.1:17,349,948-17,349,970 (+)
Located in precursor hsa-483-54.1
12:6,963,742-6,963,764 (+)
Located in precursor mmu-483-54.1
6:124,718,324-124,718,346 (-)
Located in precursor oar-54.1
Chromosome3:207,226,032-207,226,054 (-)
Located in precursor ptr-54.1
chr12:7,286,127-7,286,149 (+)
Located in precursor rno-483-54.1
chr4:157,236,788-157,236,810 (-)
Located in precursor tch-54.1
NW_006208857.1:350,362-350,384 (-)
MFE -1.50 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1