miRNA miRCarta

m-39

Accession m-39
Sequence (5' -> 3') (21 nts)  UUCACAGUGGCUAAGUUCUGC
Sequence (5' -> 3') with flanks GUUCACAGUGGCUAAGUUCUGCACC
similar to miRNAs from miRBase aca-miR-27b-3p (MIMAT0021908)
bta-miR-27b (MIMAT0003546)
cfa-miR-27b (MIMAT0006613)
cgr-miR-27b-3p (MIMAT0023877)
chi-miR-27b-3p (MIMAT0036108)
eca-miR-27b (MIMAT0013114)
fru-miR-27b (MIMAT0002951)
gga-miR-27b-3p (MIMAT0001187)
ggo-miR-27b (MIMAT0024112)
hsa-miR-27b-3p (MIMAT0000419)
mdo-miR-27b-3p (MIMAT0004177)
mml-miR-27b-3p (MIMAT0006167)
mmu-miR-27b-3p (MIMAT0000126)
oha-miR-27b-3p (MIMAT0036868)
ppy-miR-27b (MIMAT0015734)
ptr-miR-27b (MIMAT0008078)
rno-miR-27b-3p (MIMAT0000798)
sha-miR-27b (MIMAT0022789)
ssa-miR-27b-3p (MIMAT0032577)
ssc-miR-27b-3p (MIMAT0013890)
tch-miR-27b-3p (MIMAT0036535)
tgu-miR-27-3p (MIMAT0014534)
tni-miR-27b (MIMAT0002952)
xtr-miR-27b (MIMAT0003571)
Organisms Anolis carolinensis
Bos taurus
Canis familiaris
Capra hircus
Cricetulus griseus
Equus caballus
Fugu rubripes
Gallus gallus
Gorilla gorilla
Homo sapiens
Macaca mulatta
Monodelphis domestica
Mus musculus
Ophiophagus hannah
Pan troglodytes
Pongo abelii
Rattus norvegicus
Salmo salar
Sarcophilus harrisii
Sus scrofa
Taeniopygia guttata
Tetraodon nigroviridis
Tupaia chinensis
Xenopus tropicalis
Located in precursor aca-240-39.1
chr2:40,591,779-40,591,799 (-)
Located in precursor bta-39.1
Chr8:83,009,883-83,009,903 (+)
Located in precursor cfa-39.1
chr01:71,678,117-71,678,137 (-)
Located in precursor cgr-240-39.1
NW_003616313.1:36,439-36,459 (-)
Located in precursor chi-240-39.1
cluster_7:81,408,062-81,408,082 (+)
Located in precursor eca-39.1
23:2,317,700-2,317,720 (-)
Located in precursor fru-39.1
21:7,173,227-7,173,247 (-)
Located in precursor gga-240-39.1
chrZ:41,649,462-41,649,482 (+)
Located in precursor ggo-39.1
9:77,106,520-77,106,540 (+)
Located in precursor hsa-240-39.1
9:95,085,505-95,085,525 (+)
Located in precursor mdo-28338-39.1
6:17,696,150-17,696,170 (+)
Located in precursor mml-240-39.1
Chromosome15:108,904,364-108,904,384 (+)
Located in precursor mmu-240-39.1
13:63,300,760-63,300,780 (+)
Located in precursor oha-240-39.1
AZIM01002605.1:297,171-297,191 (-)
Located in precursor ppy-39.1
9:91,048,871-91,048,891 (+)
Located in precursor ptr-39.1
chr9:72,784,031-72,784,051 (+)
Located in precursor rno-240-39.1
chr17:823,521-823,541 (+)
Located in precursor sha-39.1
NW_003823484.1:1,160,130-1,160,150 (+)
Located in precursor ssa-240-39.1
ssa20:36,877,085-36,877,105 (-)
Located in precursor ssa-240-39.2
ssa24:7,912,614-7,912,634 (+)
Located in precursor ssc-240-39.1
Chr10:27,079,971-27,079,991 (-)
Located in precursor tch-39.1
NW_006205008.1:264,653-264,673 (+)
Located in precursor tgu-240-39.1
chrZ:9,900,334-9,900,354 (-)
Located in precursor tni-39.1
CAAE01004775.1:3,427-3,447 (-)
Located in precursor tni-39.2
CAAE01015023.1:589,750-589,770 (+)
Located in precursor xtr-39.1
Chr01:123,463,758-123,463,778 (+)
MFE -0.60 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1