miRNA miRBase

xtr-miR-9a-5p (MIMAT0003553)

Accession MIMAT0003553
Name xtr-miR-9a-5p
similar to following miRCarta miRNAs m-104
Organism Xenopus tropicalis
Genome JGI 4.2
Sequence (5' -> 3')
(23 nts)
UCUUUGGUUAUCUAGCUGUAUGA
Located in precursor xtr-mir-9a-2 (MI0004794)
GL172712.1:2,624,721-2,624,743 (-)
Located in precursor xtr-mir-9a-1 (MI0004793)
GL173063.1:12,046-12,068 (+)
MFE -0.20 kcal/mol
first miRBase version 8.1
last miRBase version 21.0
Experiments
experiment Pubmed link
Northern blot 18032731

Targets integrated in miRCarta

experimental
miRTarBase v6.1 0
predicted
microT-CDS v5.0 (score ≥ 0.7) 0
TargetScan v7.1 0