miRCarta is a database featuring miRNA and precursor data from miRBase
as well as newly predicted miRNAs from miRMaster and publications of Londin et al. and Backes et al..
Furthermore, we integrated information about predicted and experimentally validated miRNA targets from various sources, such as miRTarBase, microT-CDS and TargetScan.
| integrated from miRBase |
organisms |
223 |
| organisms with genomic annotations |
108 |
| miRNAs |
35,828 |
| precursors |
28,645 |
| precursor families |
1,983 |
| integrated from miRNA-target interaction databases |
miRNA-target interactions with experimental evidence |
363,977 |
| predicted miRNA-target interactions |
11,295,757 |
| integrated NGS data processed by miRMaster |
experiments |
18,035 |
| number of total mapped reads |
169,411,518,667 |
| miRCarta new additions/updates |
integrated miRNAs and miRNA candidates |
44,347 |
| integrated precursors and precursor candidates |
39,086 |
| organisms |
148 |
| organisms with genomic annotations |
148 |